Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015860585.1_cds_XP_016514673.1_27099
CDS Infomation

[gene=LOC107831427] [db_xref=GeneID:107831427] [protein=diphthine--ammonia ligase-like] [protein_id=XP_016514673.1] [location=join(12309..12386,12470..12541,15467..15546,15879..16104,16204..16236,17268..17350,17425..17497,17948..18293,18448..18779,18969..19306,19562..19916,20065..20280)] [gbkey=CDS]
Sequence

ATGAAAGTCGTGGCTTTAGTCAGTGGCGGCAAAGACAGTTGCTTTGCCATGATGAAATGC
ATTCATTATGGTCACGAGATTGTTGCGTTGGCTAATTTGATTCCCGCGGATGATGCAACC
GATGAGCTTGATAGCTACATGTATCAAACTGTTGGGCACCAGATAGTTGTTAGCTATGCA
AAATGCATGGGACTCCCATTATTCCGGAGGCGAATTCAAGGATCCACAAGGCATCATGAC
CTAAGCTACAGTATGACTCCTGGTGATGAAGTTGAAGATATGTTTATACTGTTGAATGAG
GTAAAAAGACAGATACCATCTGTTGCTGCAGTATCTTCTGGTGCAATTGCATCTGACTAC
CAGAGATTACGAGTGGAAAGTGTATGTTCAAGGTTAGGGCTTGTTTCTTTGGCATACCTA
TGGAAGCAAGACCAATCATTTCTTCTACAGGAAATGATAAGAAGTGGAATTATTGCAATA
CTAGTGAAGGTTGCTGCTATTGGATTGGACCCCTCAAAACACTTGGGAAAAGAGCTAGTA
TATCTGGAGTCCCATCTCCACAAGCTAAAAGAGTTATATGGAATAAATGTCTGTGGTGAA
GGTGGAGAATATGAATCATTAACCCTTGATTGCCCTCTGTTTAAAAATGCGCGGATTCTG
CTGGATGAATTTCAAATCGTCTTGCATTCTTCAGATGCCATAGCCCCTGTTGGCATCGTC
CATCCCCTGGCATTCCATCTCGAAAGGAAGGTAGAGTCAATATCTTCAAATGCCATTGAT
GAAGGCAGCAATGTCTTCCAGGAGAACGTGGATAAAGTATTTGAAGTGCATGGAGATGCC
CAACAAGATGGTGAAGCTGTTGGCGGATTTGTTGCTGTAAGCTCTAAGCGACCAGATGTC
AGTAAGGAGGAGCTCAAATTTTCAAAAACAAAGAAGGATGATATCTTTTCTATTTCTTGC
TGGCTCCAAGATTCGTGTAAAAATTCAGCAGATTTGCGGGAGGATCTGGAGGTTGTTTTA
ATGAGAATTGAAGCTCTACTCGTGGAAAATGGTTCCTCTTGGGAAAATGTACTATATATC
CATCTTTATATTGCCGATATGGATGAGTTTGCAGTGGCAAATGAAACCTATGTCAGATAT
ATTACTCAGGAGAAGTGTCGTTTTGGTGTACCATCACGGTCTACCATTGAGCTCCCTCTA
TTGCTAGTTGGTTTAGGGAGGGCATATATTGAAGTTTTAGTGGCAAATGATCCTACTAAA
AAGGTCTTGCATGTACAAAGCATTTCTTGCTGGGCCCCTAGTTGTATTGGTCCATACAGC
CAGGCTACATTGCACAATGACATCCTACACATGGCAGGACAGCTGGGGCTTGACCCAGCA
ACAATGGTGCTCTGTGAAGGAGGTCCAGTTGCTGAACTTGAACAGGCACTGGAAAACAGT
GAAGCTGTGGCTAGAAGCTTTAATTGTTCAATATCTACATCAGCCATAGTCTTTGTCATA
TATTGTTCAGCATCCATAGAAACATCAGAAAGAGTTGTTGTTCAGAACAAGGCAGAAGCA
CTTCTTAATCAAATGAAGTCGCTCCATGCTGAGGGCGCAAAGAAGTCCAAAGTCCTAGAT
CCAATTTTCCTATATATTCTTGTTCCTGATCTGCCAAAAAGAGCACTGGTTGAAGTGAAG
CCCATGCTTTACACTGGGGAGTATATGTCGGCTCCAAGTGACCATGCCATGCAGTATCAA
TCCACAGGACAAGGTTATTGGGGCTTTGAGTATGAAACGTGGCATGACTTTTGCCTTCAG
AAATGTGTTGCTTATGGGAAAGTATGCACAGCAATTCTTTCAGTTACTGAAGAGCTTGCA
GGAAAAATCTGCTCCCTGGCCAATGTTGCAGGTCATGCCAGTGTCAAGTCCAAAGGTCCT
GTTGAAAAGGAACAAGTCATAATGATCGCAAGATTTTGTATTTATCGTCTTGATAAAGTC
CTTTTGGAGAATAATTTCTCTTGGGACGACGTAATGAATTTCAGGCTCTACTTCGCAAGT
AGCCTTAATATCCCTCATGGAACATTGTCTCAAATCTTCACTGATGTTTATAATGAATTT
GCTCAGATGAGTCAAAGAGTTAAAGTAAATGCTGAGCCTATTTTAAATATCGTTCCAGTC
TTGGGTGCTGGGAAGTCTTTATCGACCTTGGATGATATATTCACATGTGAATTCATCGCT
AGGAAATGTTAG

Peptide Sequence

PEP ID

XP_016514673.1
PEP Infomation

PREDICTED: diphthine--ammonia ligase-like [Nicotiana tabacum]
Sequence

MKVVALVSGGKDSCFAMMKCIHYGHEIVALANLIPADDATDELDSYMYQTVGHQIVVSYA
KCMGLPLFRRRIQGSTRHHDLSYSMTPGDEVEDMFILLNEVKRQIPSVAAVSSGAIASDY
QRLRVESVCSRLGLVSLAYLWKQDQSFLLQEMIRSGIIAILVKVAAIGLDPSKHLGKELV
YLESHLHKLKELYGINVCGEGGEYESLTLDCPLFKNARILLDEFQIVLHSSDAIAPVGIV
HPLAFHLERKVESISSNAIDEGSNVFQENVDKVFEVHGDAQQDGEAVGGFVAVSSKRPDV
SKEELKFSKTKKDDIFSISCWLQDSCKNSADLREDLEVVLMRIEALLVENGSSWENVLYI
HLYIADMDEFAVANETYVRYITQEKCRFGVPSRSTIELPLLLVGLGRAYIEVLVANDPTK
KVLHVQSISCWAPSCIGPYSQATLHNDILHMAGQLGLDPATMVLCEGGPVAELEQALENS
EAVARSFNCSISTSAIVFVIYCSASIETSERVVVQNKAEALLNQMKSLHAEGAKKSKVLD
PIFLYILVPDLPKRALVEVKPMLYTGEYMSAPSDHAMQYQSTGQGYWGFEYETWHDFCLQ
KCVAYGKVCTAILSVTEELAGKICSLANVAGHASVKSKGPVEKEQVIMIARFCIYRLDKV
LLENNFSWDDVMNFRLYFASSLNIPHGTLSQIFTDVYNEFAQMSQRVKVNAEPILNIVPV
LGAGKSLSTLDDIFTCEFIARKC

Transcript Sequence

Gene sequence data has not been registered.